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Cytoscape (Network) templates

Biology — Bacterial Growth Curve

The four phases of a batch culture.

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{
  "elements":[
    {"data":{"id":"lag","label":"Lag phase"}},
    {"data":{"id":"log","label":"Log (exponential) phase"}},
    {"data":{"id":"stationary","label":"Stationary phase"}},
    {"data":{"id":"death","label":"Death phase"}},
    {"data":{"id":"nutrients","label":"Nutrients deplete"}},
    {"data":{"id":"waste","label":"Waste accumulates"}},
    {"data":{"source":"lag","target":"log"}},
    {"data":{"source":"log","target":"stationary"}},
    {"data":{"source":"stationary","target":"death"}},
    {"data":{"source":"nutrients","target":"stationary"}},
    {"data":{"source":"waste","target":"death"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}