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Cytoscape (Network) templates

Biology — Phagocytosis

How a phagocyte engulfs and destroys a pathogen.

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{
  "elements":[
    {"data":{"id":"path","label":"Pathogen"}},
    {"data":{"id":"chemo","label":"Chemotaxis"}},
    {"data":{"id":"adhere","label":"Recognition / binding"}},
    {"data":{"id":"engulf","label":"Engulfment"}},
    {"data":{"id":"phago","label":"Phagosome"}},
    {"data":{"id":"lyso","label":"Fuses with lysosome"}},
    {"data":{"id":"digest","label":"Digestion (enzymes)"}},
    {"data":{"id":"present","label":"Antigen presentation"}},
    {"data":{"source":"path","target":"chemo"}},
    {"data":{"source":"chemo","target":"adhere"}},
    {"data":{"source":"adhere","target":"engulf"}},
    {"data":{"source":"engulf","target":"phago"}},
    {"data":{"source":"phago","target":"lyso"}},
    {"data":{"source":"lyso","target":"digest"}},
    {"data":{"source":"digest","target":"present"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}