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Cytoscape (Network) templates

Biology — Fatty Acid Synthesis

Building a fatty acid two carbons at a time.

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{
  "elements":[
    {"data":{"id":"accoa","label":"Acetyl-CoA"}},
    {"data":{"id":"malcoa","label":"Malonyl-CoA"}},
    {"data":{"id":"acp","label":"ACP loading"}},
    {"data":{"id":"cond","label":"Condensation"}},
    {"data":{"id":"red","label":"Reduction (NADPH)"}},
    {"data":{"id":"palm","label":"Palmitate"}},
    {"data":{"source":"accoa","target":"malcoa","label":"carboxylase"}},
    {"data":{"source":"malcoa","target":"acp"}},
    {"data":{"source":"acp","target":"cond"}},
    {"data":{"source":"cond","target":"red"}},
    {"data":{"source":"red","target":"cond","label":"x7 cycles"}},
    {"data":{"source":"red","target":"palm"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}