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Cytoscape (Network) templates

Biology — Bacterial Quorum Sensing

Population-density signalling that switches on group behaviours.

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{
  "elements":[
    {"data":{"id":"cell","label":"Bacterial cell"}},
    {"data":{"id":"ahl","label":"Autoinducer (AHL)"}},
    {"data":{"id":"pool","label":"Extracellular pool"}},
    {"data":{"id":"thresh","label":"Threshold reached"}},
    {"data":{"id":"recep","label":"LuxR receptor"}},
    {"data":{"id":"genes","label":"Target genes (biofilm, virulence)"}},
    {"data":{"source":"cell","target":"ahl","label":"synthase"}},
    {"data":{"source":"ahl","target":"pool"}},
    {"data":{"source":"pool","target":"thresh","label":"high density"}},
    {"data":{"source":"thresh","target":"recep"}},
    {"data":{"source":"recep","target":"genes"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}