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Cytoscape (Network) templates

Biology — Vesicle Transport

Budding, trafficking and SNARE-mediated fusion.

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{
  "elements":[
    {"data":{"id":"cargo","label":"Cargo molecule"}},
    {"data":{"id":"bud","label":"Vesicle buds (coat protein)"}},
    {"data":{"id":"motor","label":"Motor proteins on cytoskeleton"}},
    {"data":{"id":"tether","label":"Tethering at target"}},
    {"data":{"id":"snare","label":"SNARE pairing"}},
    {"data":{"id":"fuse","label":"Membrane fusion"}},
    {"data":{"source":"cargo","target":"bud"}},
    {"data":{"source":"bud","target":"motor"}},
    {"data":{"source":"motor","target":"tether"}},
    {"data":{"source":"tether","target":"snare"}},
    {"data":{"source":"snare","target":"fuse"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}