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Cytoscape (Network) templates

Biology — Autophagy

Self-digestion and recycling of cell components.

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{
  "elements":[
    {"data":{"id":"stress","label":"Starvation / stress"}},
    {"data":{"id":"mtor","label":"mTOR inhibited"}},
    {"data":{"id":"init","label":"Phagophore initiation"}},
    {"data":{"id":"auto","label":"Autophagosome"}},
    {"data":{"id":"fuse","label":"Fuses with lysosome"}},
    {"data":{"id":"degrade","label":"Cargo degraded -> recycled"}},
    {"data":{"source":"stress","target":"mtor"}},
    {"data":{"source":"mtor","target":"init"}},
    {"data":{"source":"init","target":"auto"}},
    {"data":{"source":"auto","target":"fuse"}},
    {"data":{"source":"fuse","target":"degrade"}}
  ],
  "layout":{"name":"breadthfirst","directed":true}
}