160 templates · page 2 of 2
3D Molecules (3Dmol) templates
Interactive 3D molecular visualization: proteins from PDB, ligands, surfaces, cartoons. WebGL-powered.
Biology — Protein G B1 Domain (PDB 1PGB)
A small protein with a classic α/β fold.
Life SciencesBiology — Villin Headpiece (PDB 1VII)
One of the smallest folded proteins.
Life SciencesBiology — Barnase (PDB 1BNI)
A bacterial ribonuclease, a folding-study model.
Life SciencesChemistry — Acetonitrile (3D, XYZ)
A common polar aprotic solvent.
Chemistry & PhysicsChemistry — Ethylamine (3D, XYZ)
A simple primary amine.
Chemistry & PhysicsChemistry — Formamide (3D, XYZ)
The simplest amide, a planar molecule.
Chemistry & PhysicsBiology — Trp-cage Mini-protein (PDB 1L2Y)
One of the smallest proteins that folds on its own.
Life SciencesBiology — Engrailed Homeodomain (PDB 1ENH)
A DNA-binding helix-turn-helix domain.
Life SciencesBiology — Cytochrome b562 (PDB 256B)
A four-helix-bundle electron carrier.
Life SciencesBiology — Glycine (3D, XYZ)
The simplest amino acid.
Life SciencesChemistry — Urea (3D, XYZ)
The first organic compound synthesised from inorganics.
Chemistry & PhysicsChemistry — Acetic Acid (3D, XYZ)
The acid of vinegar in three dimensions.
Chemistry & PhysicsBiology — Haemoglobin (PDB 1A3N)
Human deoxyhaemoglobin tetramer.
Life SciencesBiology — Lysozyme (PDB 1AKI)
A high-resolution hen egg-white lysozyme.
Life SciencesBiology — Glucagon (PDB 1GCN)
The blood-glucose-raising peptide hormone.
Life SciencesChemistry — Water (3D, XYZ)
The bent H₂O molecule as 3D ball-and-stick. Drag to rotate.
Chemistry & PhysicsChemistry — Benzene (3D, XYZ)
The planar aromatic ring C₆H₆. Drag to rotate.
Chemistry & PhysicsBiology — p53 Tumour Suppressor (PDB 1TUP)
The p53 core domain bound to DNA — the guardian of the genome.
Life SciencesBiology — Acetylcholinesterase (PDB 1ACJ)
The synaptic enzyme that clears acetylcholine, here with tacrine.
Life SciencesBiology — Salivary Amylase (PDB 1SMD)
Human salivary α-amylase, the starch-digesting enzyme.
Life SciencesChemistry — Acetone (3D, XYZ)
The simplest ketone, (CH₃)₂C=O. Drag to rotate.
Chemistry & PhysicsBiology — Glucose Transporter GLUT1 (PDB 4PYP)
The human passive glucose transporter in the membrane.
Life SciencesBiology — β2-Adrenergic Receptor (PDB 2RH1)
A classic G-protein-coupled receptor structure.
Life SciencesBiology — RuBisCO (PDB 1RCX)
The carbon-fixing enzyme of photosynthesis.
Life SciencesBiology — Citrate Synthase (PDB 1CTS)
The first enzyme of the citric-acid cycle.
Life SciencesBiology — Topoisomerase I–DNA (PDB 1A36)
An enzyme that relaxes DNA supercoiling.
Life SciencesBiology — Glycogen Phosphorylase (PDB 1GPB)
The enzyme that mobilises glucose from glycogen.
Life SciencesBiology — Nicotinic Acetylcholine Receptor (PDB 2BG9)
The ligand-gated ion channel of the neuromuscular junction.
Life SciencesBiology — SARS-CoV-2 Spike (PDB 6VXX)
The closed prefusion spike glycoprotein trimer.
Life SciencesBiology — GroEL–GroES Chaperonin (PDB 1AON)
The folding machine that helps proteins reach their shape.
Life SciencesBiology — Top7 Designed Protein (PDB 1QYS)
A protein fold designed from scratch by computation.
Life SciencesChemistry — Nitric Oxide (3D, XYZ)
The diatomic radical NO. Drag to rotate.
Chemistry & PhysicsChemistry — Carbon Disulfide (3D, XYZ)
The linear molecule S=C=S. Drag to rotate.
Chemistry & PhysicsChemistry — Carbonyl Sulfide (3D, XYZ)
The linear molecule O=C=S. Drag to rotate.
Chemistry & PhysicsChemistry — Chlorine (3D, XYZ)
The diatomic molecule Cl₂. Drag to rotate.
Chemistry & PhysicsChemistry — Phosgene (3D, XYZ)
The trigonal planar molecule COCl₂. Drag to rotate.
Chemistry & PhysicsBiology — Bacteriorhodopsin (PDB 1C3W)
A light-driven proton pump with seven helices.
Life SciencesBiology — Cytochrome c Oxidase (PDB 1OCC)
Complex IV, the final enzyme of the respiratory chain.
Life SciencesBiology — Kinesin Motor (PDB 1BG2)
The motor domain that walks along microtubules.
Life SciencesBiology — Photosynthetic Reaction Centre (PDB 1PRC)
The membrane complex that converts light to charge separation.
Life SciencesBiology — Lac Repressor (PDB 1LBG)
The protein that controls the lac operon.
Life SciencesBiology — TATA-Binding Protein (PDB 1CDW)
A transcription factor that bends DNA at the TATA box.
Life SciencesBiology — HIV Reverse Transcriptase (PDB 1HMV)
The enzyme that copies viral RNA into DNA.
Life SciencesBiology — Calcium ATPase / SERCA (PDB 1SU4)
The pump that returns calcium to the sarcoplasmic reticulum.
Life SciencesChemistry — Sulfur Trioxide (3D, XYZ)
The trigonal planar molecule SO₃. Drag to rotate.
Chemistry & PhysicsChemistry — Nitrogen Trifluoride (3D, XYZ)
The pyramidal molecule NF₃. Drag to rotate.
Chemistry & PhysicsChemistry — Carbon Tetrafluoride (3D, XYZ)
The tetrahedral molecule CF₄. Drag to rotate.
Chemistry & PhysicsChemistry — Silicon Tetrachloride (3D, XYZ)
The tetrahedral molecule SiCl₄. Drag to rotate.
Chemistry & PhysicsChemistry — Xenon Difluoride (3D, XYZ)
The linear noble-gas compound XeF₂. Drag to rotate.
Chemistry & PhysicsChemistry — Phosphorus Pentafluoride (3D, XYZ)
The trigonal-bipyramidal molecule PF₅. Drag to rotate.
Chemistry & PhysicsChemistry — Sulfur Tetrafluoride (3D, XYZ)
The seesaw-shaped molecule SF₄. Drag to rotate.
Chemistry & PhysicsChemistry — Chlorine Trifluoride (3D, XYZ)
The T-shaped molecule ClF₃. Drag to rotate.
Chemistry & PhysicsChemistry — Iodine Pentafluoride (3D, XYZ)
The square-pyramidal molecule IF₅. Drag to rotate.
Chemistry & PhysicsChemistry — Thionyl Chloride (3D, XYZ)
The pyramidal molecule SOCl₂. Drag to rotate.
Chemistry & PhysicsChemistry — Sulfuryl Chloride (3D, XYZ)
The tetrahedral molecule SO₂Cl₂. Drag to rotate.
Chemistry & PhysicsChemistry — Phosphorus Oxychloride (3D, XYZ)
The tetrahedral molecule POCl₃. Drag to rotate.
Chemistry & PhysicsChemistry — Diborane (3D, XYZ)
B₂H₆ with its two bridging hydrogens. Drag to rotate.
Chemistry & PhysicsChemistry — Bromine Pentafluoride (3D, XYZ)
The square-pyramidal molecule BrF₅. Drag to rotate.
Chemistry & PhysicsChemistry — Cyanogen (3D, XYZ)
The linear pseudohalogen N#C-C#N. Drag to rotate.
Chemistry & PhysicsChemistry — White Phosphorus (3D, XYZ)
The tetrahedral P₄ molecule. Drag to rotate.
Chemistry & Physics